Hobbes 1.3 Source Code

Hobbes Source Code
License

Please consult the manual for system requirements and compilation instructions.

Hobbes Pre-Built Indexes

Hg18

Hg18 Reference Sequence, originally from UCSC
Hg18 Hobbes Index, 16-bit bitvector (17GB)
Hg18 Hobbes Index, 32-bit bitvector (22GB)

Hg19

Hg19 Reference Sequence, originally from UCSC
Hg19 Hobbes Index, 16-bit bitvector (17GB)
Hg19 Hobbes Index, 32-bit bitvector (22GB)

Mouse mm9 37

Mouse Reference Sequence, originally from UCSC
Mouse Hobbes Index, 16-bit bitvector (15GB)
Mouse Hobbes Index, 32-bit bitvector (20GB)

Fly Drosophila dm3

Fly Reference Sequence, originally from UCSC
Fly Hobbes Index, 16-bit bitvector (1GB)
Fly Hobbes Index, 32-bit bitvector (1GB)

Release History

Version 1.3 Source (February 03, 2012), Fixed a bug in the Bowtie-Like output format

Version 1.3 Source (January 23, 2012)

Version 1.3 (November 01, 2011)

Version 1.2 (September 01, 2011)

Version 1.1 (July 15, 2011)

Version 1.0 (March 31, 2011)

© 2011 ISG | Website maintained by Athena Ahmadi | Created by Yun Huang | Original design Andreas Viklund